FoSSA: Fundamentals of Statistical Software & Analysis
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Course Information
Meet the Teaching Team -
Course Dataset 1
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Course Dataset 2
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MODULE A1: INTRODUCTION TO STATISTICS USING R, STATA, AND SPSSA1.1 What is Statistics?
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A1.2.1a Introduction to Stata
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A1.2.2b: Introduction to R
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A1.2.2c: Introduction to SPSS
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A1.3: Descriptive Statistics
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A1.4: Estimates and Confidence Intervals
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A1.5: Hypothesis Testing
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A1.6: Transforming Variables
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End of Module A11 Quiz
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MODULE A2: POWER & SAMPLE SIZE CALCULATIONSA2.1 Key Concepts
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A2.2 Power calculations for a difference in means
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A2.3 Power Calculations for a difference in proportions
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A2.4 Sample Size Calculation for RCTs
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A2.5 Sample size calculations for cross-sectional studies (or surveys)
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A2.6 Sample size calculations for case-control studies
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End of Module A21 Quiz
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MODULE B1: LINEAR REGRESSIONB1.1 Correlation and Scatterplots
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B1.2 Differences Between Means (ANOVA 1)
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B1.3 Univariable Linear Regression
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B1.4 Multivariable Linear Regression
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B1.5 Model Selection and F-Tests
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B1.6 Regression Diagnostics
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End of Module B11 Quiz
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MODULE B2: MULTIPLE COMPARISONS & REPEATED MEASURESB2.1 ANOVA Revisited – Post-Hoc Testing
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B2.2 Correcting For Multiple Comparisons
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B2.3 Two-way ANOVA
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B2.4 Repeated Measures and the Paired T-Test
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B2.5 Repeated Measures ANOVA
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End of Module B21 Quiz
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MODULE B3: NON-PARAMETRIC MEASURESB3.1 The Parametric Assumptions
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B3.2 Mann-Whitney U Test
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B3.3 Kruskal-Wallis Test
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B3.4 Wilcoxon Signed Rank Test
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B3.5 Friedman Test
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B3.6 Spearman’s Rank Order Correlation
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End of Module B31 Quiz
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MODULE C1: BINARY OUTCOME DATA & LOGISTIC REGRESSIONC1.1 Introduction to Prevalence, Risk, Odds and Rates
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C1.2 The Chi-Square Test and the Test For Trend
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C1.3 Univariable Logistic Regression
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C1.4 Multivariable Logistic Regression
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End of Module C11 Quiz
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MODULE C2: SURVIVAL DATAC2.1 Introduction to Survival Data
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C2.2 Kaplan-Meier Survival Function & the Log Rank Test
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C2.3 Cox Proportional Hazards Regression
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C2.4 Poisson Regression
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End of Module C21 Quiz
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A Note about the Fossa Certificate
The quiz below is designed to test your knowledge of the material covered in the module. Best of luck!
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Question 1 of 10
1. Question
Based on the below two-by-two table, choose all that are correct.
Exposed Non-exposed Diseased 59 42 Non-diseased 121 358 CorrectIncorrect -
Question 2 of 10
2. Question
A cohort study on smoking and dementia reported a relative risk of dementia = 1.03 (95% CI 0.75-1.41) for smokers compared with non-smokers. How would you interpret this?
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Question 3 of 10
3. Question
In a dataset of 3000 male current drinkers, a chi-square test for association was performed between current smoking (1=yes vs. 0=no) and alcohol intake (recorded by a categorical variable wkcat; 1: 1-139 g/week, 2: 140-279 g/week, 3: 280-419 g/week, 4: 420+ g/week). The following output was obtained. What can you conclude based on the chi-square test result?
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Question 4 of 10
4. Question
When would you want to perform a chi-square test for linear trend instead of (or in addition to) a chi-square test for association?
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Question 5 of 10
5. Question
Questions 5-9 are based on ananalyses conducted in a fictitious study of 20000 Chinese men to investigate the risk factors for prevalent chronic obstructive pulmonary disease (COPD) (recorded by the binary variable has_copd ).
A logistic regression model was run to investigate the relationship between prevalent COPD and age (continuous variable, in years). How would you interpret the output?
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Question 6 of 10
6. Question
[Continuing from the previous question]
Another logistic regression model was run to investigate the relationship between COPD and education groups (recorded by a categorical variable called education, coded from low to high level: 1= no formal school; 2= primary school; 3= middle or high school; 4= technical school/college or above). How would you interpret the results?
CorrectIncorrect -
Question 7 of 10
7. Question
[Continuing from the previous question]
Instead of a categorical variable, this time the education variable was input as an ordinal variable in the logistic regression. You obtained a single OR of prevalent COPD associated with the ordinal variable education, which is 0.54 (95% CI: 0.51-0.58) with p<0.001. Choose all that are correct.
CorrectIncorrect -
Question 8 of 10
8. Question
After running separate univariable logistic regression models on prevalent COPD with age, education, ever-alcohol drinking (recorded by a binary variable evralc), and ever-smoking (recorded by a binary variable evrsmk), all of there variables were significantly associated with COPD. However, you wondered if confounding could explain some of these unvariable associations. You therefore ran a multivariable logistic regression model including all these variables. How would you interpret the results?
CorrectIncorrect -
Question 9 of 10
9. Question
You wanted to investigate if there is potential interaction between smoking and age on prevalent COPD. You fitted the below multivariable model with an interaction term between ever-smoking (binary variable evrsmk: 0= never-smokers, 1= ever-smokers) and age groups (binary variable agebin : 0= below 60 years, 1 = 60 years or above). Based on these output, choose all that are correct.
CorrectIncorrect -
Question 10 of 10
10. Question
(modified from Discovering Statistics Using IBM SPSS Statistics, by Andy Field)
When analysing continuous predictor variables in logistic regression, we assume a:
CorrectIncorrect